PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100062220101
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 270aa    MW: 29409.9 Da    PI: 6.421
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100062220101genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.71.3e-3351105155
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   k+rlrWt+eLHerFv av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Ote100062220101|100062220101  51 KQRLRWTHELHERFVTAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 105
                                   79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.06648108IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.1E-3250106IPR009057Homeodomain-like
SuperFamilySSF466898.24E-1850105IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-2551106IPR006447Myb domain, plants
PfamPF002493.2E-953104IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MKYVPVFSVP SSNLVCRNPL VQTQLLDCHI DEMDSIGGGN NATGNANLAS KQRLRWTHEL  60
HERFVTAVAQ LGGPDRATPK GVLRVMGVQG LTIYHVKSHL QKYRLAKYLP DSSCDGAKAE  120
KKESGDMFSG LDGSSKVNES IPSQASQFLL LSRPYYETIE NLTELPASGV HEPGTEDIRP  180
ESENKTDPGT PAASSEPPFV DKERNPSKSL SVNDSHEPQT PDSVSHLVSP LLSPNEKLAK  240
RQRGSTDFAC IKPEMVLSHS ILESSSSPSF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095855.11e-108PREDICTED: myb family transcription factor APL-like
RefseqXP_011095856.11e-108PREDICTED: myb family transcription factor APL-like
TrEMBLA0A061GGR13e-90A0A061GGR1_THECC; Myb-like HTH transcriptional regulator family protein
STRINGVIT_00s0475g00040.t015e-89(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451